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dna microarray chip  (TaKaRa)


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    Structured Review

    TaKaRa dna microarray chip
    Dna Microarray Chip, supplied by TaKaRa, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/dna+microarray+chips/pm38136973-100-5-9
    Average 86 stars, based on 1 article reviews
    dna microarray chip - by Bioz Stars, 2026-11
    86/100 stars

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    Related Articles

    Gene Expression:

    Article Title: Ultraviolet-A radiation induces changes in cyclin G gene expression in mouse melanoma B16-F1 cells
    Article Snippet: .. Gene expression of 1176 tumor-related genes was analyzed using Atlas mouse cancer 1.2 cDNA array (Clonetech, USA). ..

    Article Title: A Dominant-Negative Mutant of ANXA7 Impairs Calcium Signaling and Enhances the Proliferation of Prostate Cancer Cells by Downregulating the IP3 Receptor and the PI3K/mTOR Pathway
    Article Snippet: .. The tumor-specific gene expression profiles in DU145 cells transfected with wt- ANXA7 , DN- ANXA7J , or p53 were determined using cDNA microarray analysis (Atlas Human Cancer 1.2 Arrays and AtlasImage 2.01 software, Clontech, Palo Alto, CA, USA). ..

    Microarray:

    Article Title: Sll1252 Coordinates Electron Transport between Plastoquinone and Cytochrome b 6 /f Complex in Synechocystis PCC 6803
    Article Snippet: .. In brief, we used a DNA microarray chip (CyanoCHIP; Takara-Bio) that covered 3079 of the 3168 open-reading frames (97% of all genes, except transposon-related genes) of the Synechocystis genome. ..

    Article Title: A Dominant-Negative Mutant of ANXA7 Impairs Calcium Signaling and Enhances the Proliferation of Prostate Cancer Cells by Downregulating the IP3 Receptor and the PI3K/mTOR Pathway
    Article Snippet: .. The tumor-specific gene expression profiles in DU145 cells transfected with wt- ANXA7 , DN- ANXA7J , or p53 were determined using cDNA microarray analysis (Atlas Human Cancer 1.2 Arrays and AtlasImage 2.01 software, Clontech, Palo Alto, CA, USA). ..

    Article Title: Sll1252 Coordinates Electron Transport between Plastoquinone and Cytochrome b 6 /f Complex in Synechocystis PCC 6803.
    Article Snippet: .. In brief, we used a DNA microarray chip (CyanoCHIP; Takara-Bio) that covered 3079 of the 3168 open-reading frames (97% of all genes, except transposon-related genes) of the Synechocystis genome. ..

    Chromatin Immunoprecipitation:

    Article Title: SAP30 promotes breast tumor progression by bridging the transcriptional corepressor SIN3 complex and MLL1
    Article Snippet: .. Reverse cross-linking was performed at 67°C for 6 hours followed by treatment with proteinase K. ChIP DNA was purified with phenol/chloroform/isoamyl alcohol (25:24:1, vol/vol) followed by treatment with RNase A and used for library preparation with a ThruPLEX DNA-Seq kit (Takara). .. ChIP-Seq libraries were sequenced with the Illumina NextSeq 500.

    Article Title: SAP30 promotes breast tumor progression by bridging the transcriptional corepressor SIN3 complex and MLL1
    Article Snippet: .. Reverse cross-linking was performed at 67°C for 6 hours followed by treatment with proteinase K. ChIP DNA was purified with phenol/chloroform/isoamyl alcohol (25:24:1, vol/vol) followed by treatment with RNase A and used for library preparation with a ThruPLEX DNA-Seq kit (Takara). .. ChIP-Seq libraries were sequenced with the Illumina NextSeq 500.

    Purification:

    Article Title: SAP30 promotes breast tumor progression by bridging the transcriptional corepressor SIN3 complex and MLL1
    Article Snippet: .. Reverse cross-linking was performed at 67°C for 6 hours followed by treatment with proteinase K. ChIP DNA was purified with phenol/chloroform/isoamyl alcohol (25:24:1, vol/vol) followed by treatment with RNase A and used for library preparation with a ThruPLEX DNA-Seq kit (Takara). .. ChIP-Seq libraries were sequenced with the Illumina NextSeq 500.

    Article Title: SAP30 promotes breast tumor progression by bridging the transcriptional corepressor SIN3 complex and MLL1
    Article Snippet: .. Reverse cross-linking was performed at 67°C for 6 hours followed by treatment with proteinase K. ChIP DNA was purified with phenol/chloroform/isoamyl alcohol (25:24:1, vol/vol) followed by treatment with RNase A and used for library preparation with a ThruPLEX DNA-Seq kit (Takara). .. ChIP-Seq libraries were sequenced with the Illumina NextSeq 500.

    DNA Sequencing:

    Article Title: SAP30 promotes breast tumor progression by bridging the transcriptional corepressor SIN3 complex and MLL1
    Article Snippet: .. Reverse cross-linking was performed at 67°C for 6 hours followed by treatment with proteinase K. ChIP DNA was purified with phenol/chloroform/isoamyl alcohol (25:24:1, vol/vol) followed by treatment with RNase A and used for library preparation with a ThruPLEX DNA-Seq kit (Takara). .. ChIP-Seq libraries were sequenced with the Illumina NextSeq 500.

    Article Title: SAP30 promotes breast tumor progression by bridging the transcriptional corepressor SIN3 complex and MLL1
    Article Snippet: .. Reverse cross-linking was performed at 67°C for 6 hours followed by treatment with proteinase K. ChIP DNA was purified with phenol/chloroform/isoamyl alcohol (25:24:1, vol/vol) followed by treatment with RNase A and used for library preparation with a ThruPLEX DNA-Seq kit (Takara). .. ChIP-Seq libraries were sequenced with the Illumina NextSeq 500.

    other:

    Article Title: MAPC therapeutics without adjunctive immunosuppressive treatment
    Article Snippet: C. MAPCs expressed mRNA for hTRT and TRF1; the POU domain transcription factor oct-4, sox-2 (required with oct-4 to maintain undifferentiated state of ES/EC, Uwanogho D., 1995), sox 11 (neural development), sox 9 (chondrogenesis) (Lefebvre V., 1998); homeodeomain transcription factors: Hox-a4 and -a5 (cervical and thoracic skeleton specification; organogenesis of respiratory tract) (Packer A I, 2000), Hox-a9 (myelopoiesis) (Lawrence H, 1997), Dlx4 (specification of forebrain and peripheral structures of head) (Akimenko M A, 1994), MSX1 (embryonic mesoderm, adult heart and muscle, chondro- and osteogenesis) (Foerst-Potts L. 1997), PDX1 (pancreas) (Offield M F, 1996).

    Transfection:

    Article Title: A Dominant-Negative Mutant of ANXA7 Impairs Calcium Signaling and Enhances the Proliferation of Prostate Cancer Cells by Downregulating the IP3 Receptor and the PI3K/mTOR Pathway
    Article Snippet: .. The tumor-specific gene expression profiles in DU145 cells transfected with wt- ANXA7 , DN- ANXA7J , or p53 were determined using cDNA microarray analysis (Atlas Human Cancer 1.2 Arrays and AtlasImage 2.01 software, Clontech, Palo Alto, CA, USA). ..

    Software:

    Article Title: A Dominant-Negative Mutant of ANXA7 Impairs Calcium Signaling and Enhances the Proliferation of Prostate Cancer Cells by Downregulating the IP3 Receptor and the PI3K/mTOR Pathway
    Article Snippet: .. The tumor-specific gene expression profiles in DU145 cells transfected with wt- ANXA7 , DN- ANXA7J , or p53 were determined using cDNA microarray analysis (Atlas Human Cancer 1.2 Arrays and AtlasImage 2.01 software, Clontech, Palo Alto, CA, USA). ..



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    The workflow chart of the easyEWAS. Abbreviations: <t>DNAm,</t> <t>DNA</t> <t>methylation;</t> DMP, differentially methylated position; DMR, differentially methylated region; GLM, general linear model; LMM, linear mixed-effects model; CoxPH, Cox proportional hazards model; QQ: quantile–quantile; Boot.CI, bootstrap-derived CI; KEGG, Kyoto Encyclopedia of Genes and Genomes.
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    The workflow chart of the easyEWAS. Abbreviations: <t>DNAm,</t> <t>DNA</t> <t>methylation;</t> DMP, differentially methylated position; DMR, differentially methylated region; GLM, general linear model; LMM, linear mixed-effects model; CoxPH, Cox proportional hazards model; QQ: quantile–quantile; Boot.CI, bootstrap-derived CI; KEGG, Kyoto Encyclopedia of Genes and Genomes.
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    Image Search Results


    The workflow chart of the easyEWAS. Abbreviations: DNAm, DNA methylation; DMP, differentially methylated position; DMR, differentially methylated region; GLM, general linear model; LMM, linear mixed-effects model; CoxPH, Cox proportional hazards model; QQ: quantile–quantile; Boot.CI, bootstrap-derived CI; KEGG, Kyoto Encyclopedia of Genes and Genomes.

    Journal: Bioinformatics Advances

    Article Title: easyEWAS: a flexible and user-friendly R package for epigenome-wide association study

    doi: 10.1093/bioadv/vbaf026

    Figure Lengend Snippet: The workflow chart of the easyEWAS. Abbreviations: DNAm, DNA methylation; DMP, differentially methylated position; DMR, differentially methylated region; GLM, general linear model; LMM, linear mixed-effects model; CoxPH, Cox proportional hazards model; QQ: quantile–quantile; Boot.CI, bootstrap-derived CI; KEGG, Kyoto Encyclopedia of Genes and Genomes.

    Article Snippet: In conclusion, easyEWAS is an R package that can be easily integrated into various DNA methylation microarrays detected by Illumina HumanMethylation Bead Chip, significantly enhancing the accessibility of EWAS.

    Techniques: DNA Methylation Assay, Methylation, Derivative Assay

    The function names and their corresponding functionalities within the easyEWAS package.

    Journal: Bioinformatics Advances

    Article Title: easyEWAS: a flexible and user-friendly R package for epigenome-wide association study

    doi: 10.1093/bioadv/vbaf026

    Figure Lengend Snippet: The function names and their corresponding functionalities within the easyEWAS package.

    Article Snippet: In conclusion, easyEWAS is an R package that can be easily integrated into various DNA methylation microarrays detected by Illumina HumanMethylation Bead Chip, significantly enhancing the accessibility of EWAS.

    Techniques: DNA Methylation Assay, Methylation, Biomarker Discovery